BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026H12LP1|AL428636
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1444 1574 0.0
>3x_Contig1444
Length = 7580
Score = 1574 bits (786), Expect = 0.0
Identities = 833/856 (97%), Gaps = 1/856 (0%)
Strand = Plus / Minus
Query: 1 atcaggaagtgtagtaataaggataacgaggtgatgaaaaccaaaagatttgatgcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2486 atcaggaagtgtagtaataaggataacgaggtgatgaaaaccaaaagatttgatgcaaca 2427
Query: 61 ttcgtaaattagaaactgctccaagaccaatcagcaggaacacttcctacaatwttttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2426 ttcgtaaattagaaactgctccaagaccaatcagcaggaacacttcctacaatattttcc 2367
Query: 121 aagtgctgccgttggtttacactaccctcagtaccattttatgcttcgtctatttttctt 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 2366 aagtgctgccgttggtttacactaccctcagtaccatttaatgcttcgtctatatttctt 2307
Query: 181 cctgttgcgggttttggcaaattgagtagtgtgttagaatggtttycactattttywttt 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 2306 cctgttgcgggttttggcaaattgagtagtgtgttagaatggtttccactattttcattt 2247
Query: 241 tyattttcacgaatcgaaccagaatgtgatgaagaagttgaggaagtagaagtagaaggt 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 tcattttcacgaatcgaaccagaatgtgatgaagaagttgaggaagtagaagtagaaggt 2187
Query: 301 ggttgctgctgctgctgttgctattctgcctgatctttggcgggtccagcctttaccaga 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 2186 ggttgctgctgctgctgttgcaattctgcctgatctttggcgggtccagccttaaccaga 2127
Query: 361 gtgtcatattcatcttagctactgtyacatatttttgatagcwcgcctaaccctccacaa 420
||||||||||||||| ||| ||||| ||||||||| |||||| |||||||||||||||||
Sbjct: 2126 gtgtcatattcatctaagcaactgtcacatattttagatagcacgcctaaccctccacaa 2067
Query: 421 ccaatgataaacttkgcgttwgggttttagtatagccagtgtctgacatgttgctggcaa 480
|||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 2066 ccaatgataaacttggcgttagggtttaagtatagccagtgtctgacatgttgctggcaa 2007
Query: 481 aatatatcaccgcwatgcctgcwgtgatgttttctttctccagaacgtgaaaattttgtg 540
|| |||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 2006 aagatatcaccgcaatgcctgcagtgatgttttctttc-ccagaacgtgaaaattttgtg 1948
Query: 541 acagtatttacaagaatgacgtttggaatctggaatccagtgctctttggtgggttgaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1947 acagtatttacaagaatgacgtttggaatctggaatccagtgctctttggtgggttgaat 1888
Query: 601 caattgtwattkcagatccctttcattacacagccaggattgaattttgtttctataagt 660
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1887 caattgtaattgcagatccctttcattacacagccaggattgaattttgtttctataagt 1828
Query: 661 gctcacaatggatgatgtggtagaatgaatacttctggcgtaatttgaattggaagtgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1827 gctcacaatggatgatgtggtagaatgaatacttctggcgtaatttgaattggaagtgtt 1768
Query: 721 cgaatgtttagacagcacagcttgtaaagttgtttgtgttacatcagatggtgtaggaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1767 cgaatgtttagacagcacagcttgtaaagttgtttgtgttacatcagatggtgtaggaga 1708
Query: 781 atgtgacttcaaatcttctatctttatgttcgtctcagaaatgtctctcaacactgcagg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1707 atgtgacttcaaatcttctatctttatgttcgtctcagaaatgtctctcaacactgcagg 1648
Query: 841 aacatacatcggtttc 856
||||||||||||||||
Sbjct: 1647 aacatacatcggtttc 1632
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6721
Number of Sequences: 1807
Number of extensions: 6721
Number of successful extensions: 215
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)